Research workbench
Structure of LMBA2991T421A
Analyse Structure of LMBA2991T421A in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6J3I
- Type
- protein
- Length
- 1,164 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Gamma-glutamyltranspeptidase
- UniProt
- A0A1B1MKD3
- Pockets
- 7 · best druggability 0.61
Structure
x-ray diffraction · 2 distinct chains · 37% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Gamma-glutamyltranspeptidase | protein | 583 | 38% helix, 17% strand | A0A1B1MKD3 |
| B | Gamma-glutamyltranspeptidase | protein | 581 | 37% helix, 18% strand | A0A1B1MKD3 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 456 | 0.61 | 0.76 | 43 | empty |
| 2 | 373 | 0.59 | 0.76 | 48 | empty |
| 3 | 394 | 0.58 | 0.75 | 52 | empty |
| 4 | 87 | 0.44 | 0.79 | 17 | empty |
| 5 | 85 | 0.43 | 0.79 | 20 | empty |
Interfaces
1 interface between chains.
- A–B · 128 Ų buried · 0 hydrogen bonds · protein-protein
Compared structures
- 6J3I · Structure of LmbA2991T421A · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A1B1MKD3
- Elsewhere: RCSB PDB 6J3I · PDBe 6J3I · UniProt A0A1B1MKD3
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