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Crystal structure of a cell division and cell wall biosynthesis protein UPF0040 from mycoplasma pneumoniae: indication of a novel fold with a possible new conserved sequence motif

Analyse Crystal structure of a cell division and cell wall biosynthesis protein UPF0040… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1N0G
Type: protein
Length: 282 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Protein mraz
UniProt: P75467
Pockets: 1 · best druggability 0.61

Structure

x-ray diffraction · 1 distinct chain · 35% helix, 23% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Protein mraz	protein	141	35% helix, 23% strand	P75467

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	68	0.61	0.91	20	empty

Interfaces

1 interface between chains.

A–B · 1399 Å² buried · 21 hydrogen bonds · protein-protein

Compared structures

1N0G · Crystal Structure of A Cell Division and Cell Wall Biosynthesis Protein UPF0040 from… · the same entry in another collection · chain A against A, TM-score 1.00
P75467 · AlphaFold monomer V2.0 prediction for transcriptional regulator mraz (P75467) · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P75467
Elsewhere: RCSB PDB 1N0G · PDBe 1N0G · UniProt P75467

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