Research workbench
The crystal structure of the chicken CREB3 bzip
Analyse The crystal structure of the chicken CREB3 bzip in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6IAK
- Type
- protein
- Length
- 428 residues
- Chains
- 7
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Uncharacterized protein
- UniProt
- F1P542
- Pockets
- 3 · best druggability 0.39
Structure
x-ray diffraction · 7 distinct chains · 92% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized protein | protein | 68 | 85% helix, 0% strand | F1P542 |
| B | Uncharacterized protein | protein | 62 | 94% helix, 0% strand | F1P542 |
| C | Uncharacterized protein | protein | 61 | 95% helix, 0% strand | F1P542 |
| D | Uncharacterized protein | protein | 62 | 95% helix, 0% strand | F1P542 |
| E | Uncharacterized protein | protein | 67 | 94% helix, 0% strand | F1P542 |
| F | Uncharacterized protein | protein | 71 | 93% helix, 0% strand | F1P542 |
| G | Uncharacterized protein | protein | 37 | 89% helix, 0% strand | F1P542 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 93 | 0.39 | 0.77 | 16 | empty |
| 2 | 83 | 0.30 | 0.72 | 15 | empty |
| 3 | 57 | 0.25 | 0.72 | 14 | empty |
Interfaces
12 interfaces between chains.
- E–F · 1178 Ų buried · 14 hydrogen bonds · protein-protein
- A–B · 1175 Ų buried · 12 hydrogen bonds · protein-protein
- C–D · 1119 Ų buried · 8 hydrogen bonds · protein-protein
- B–F · 463 Ų buried · 2 hydrogen bonds · protein-protein
- C–G · 443 Ų buried · 2 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 6IAK · The crystal structure of the chicken CREB3 bZIP · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt F1P542
- Elsewhere: RCSB PDB 6IAK · PDBe 6IAK · UniProt F1P542
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