Flavin analogue sheds light on light-oxygen-voltage domain mechanism

Structure

x-ray diffraction · 1 distinct chain · 39% helix, 30% strand (DSSP).

Ligands and binding sites

• 5DD · [(2~{R},3~{S},4~{S})-5-[(4~{a}~{R})-7,8-dimethyl-2,4-bis(oxidanylidene)-4~{a},5-dihydropyrimido[4,5-b]quinolin-10-yl]-2,3,4-tris(oxidanyl)pentyl] dihydrogen phosphate · ligand · chains A
• 9O9 · 1-deoxy-1-(7,8-dimethyl-2,4-dioxo-3,4-dihydropyrimido[4,5-b]quinolin-10(2H)-yl)-5-O-phosphono-D-ribitol · ligand · chains A
• MG · Magnesium ion · metal · chains A
• CL · Chloride ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Compared structures

• 6I25 · Flavin Analogue Sheds Light on Light-Oxygen-Voltage Domain Mechanism · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt C5NSW6
• Elsewhere: RCSB PDB 6I25 · PDBe 6I25 · UniProt C5NSW6