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Pepducin ut-PEP2 a biased allosteric agonist of urotensin-II receptor

Analyse Pepducin ut-PEP2 a biased allosteric agonist of urotensin-II receptor in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6HVK
Type
protein
Length
12 residues
Chains
1
Method
solution nmr
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Urotensin-2 receptor
UniProt
Q9UKP6
Ligands
ACE, NH2

Structure

solution nmr · 1 distinct chain · 0% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AUrotensin-2 receptorprotein120% helix, 0% strandQ9UKP6

Ligands and binding sites

  • ACE · Acetyl group · ligand · chains A
  • NH2 · Amino group · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 1 covalent (covalent ligand).

Compared structures

  • 6HVK · Pepducin UT-Pep2 a biased allosteric agonist of Urotensin-II receptor · the same entry in another collection · chain A against A, TM-score 0.95
  • Q9UKP6 · AlphaFold monomer V2.0 prediction for urotensin-2 receptor (Q9UKP6) · a predicted model of the same protein · chain A against A, TM-score 0.36

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