Research workbench
Reovirus LAMBDA3 native structure
Analyse Reovirus LAMBDA3 native structure in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1MUK
- Type
- protein
- Length
- 1,256 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Minor core protein lambda 3
- UniProt
- P17378
- Pockets
- 16 · best druggability 0.77
Structure
x-ray diffraction · 1 distinct chain · 49% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Minor core protein lambda 3 | protein | 1256 | 49% helix, 14% strand | P17378 |
Pockets
16 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1080 | 0.77 | 0.79 | 100 | empty |
| 2 | 90 | 0.75 | 0.97 | 32 | empty |
| 3 | 468 | 0.67 | 0.78 | 51 | empty |
| 4 | 235 | 0.59 | 0.80 | 37 | empty |
| 5 | 50 | 0.58 | 0.91 | 14 | empty |
Compared structures
- 1MUK · reovirus lambda3 native structure · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P17378
- Elsewhere: RCSB PDB 1MUK · PDBe 1MUK · UniProt P17378
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