Research workbench
Crystal structures of the murine class I major histocompatibility complex H-2DBM13 in complex with adenovirus-derived peptide AD10
Analyse Crystal structures of the murine class I major histocompatibility complex… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6H6H
- Type
- protein
- Length
- 763 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q31167, P01887
- Ligands
- SO4
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 272 | — | Q31167 |
| D | — | protein | 273 | — | Q31167 |
| B, E | — | protein | 99 | — | P01887 |
| C, F | — | protein | 10 | — | — |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 15 copies · chains A, C, D, E, B
- GOL · Glycerol · additive · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6H6H · Crystal structures of the murine class I major histocompatibility complex H-2Dbm13 in… · the same entry in another collection · chain F against F, TM-score 1.00
- P01887 · AlphaFold monomer V2.0 prediction for beta-2-microglobulin (P01887) · a predicted model of the same protein · chain B against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q31167
- Every structure of UniProt P01887
- Elsewhere: RCSB PDB 6H6H · PDBe 6H6H · UniProt Q31167 · UniProt P01887
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