Research workbench
Crystal structure of ganp, a glucose-galactose binding protein from geobacillus stearothermophilus
Analyse Crystal structure of ganp, a glucose-galactose binding protein from geobacillus… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6GQ0
- Type
- protein
- Length
- 280 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative sugar binding protein
- UniProt
- W8QN64
- Pockets
- 2 · best druggability 0.62
Structure
x-ray diffraction · 1 distinct chain · 45% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative sugar binding protein | protein | 280 | 45% helix, 21% strand | W8QN64 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 127 | 0.62 | 0.86 | 23 | empty |
| 2 | 74 | 0.40 | 0.79 | 15 | empty |
Compared structures
- 6GQ0 · Crystal structure of GanP, a glucose-galactose binding protein from Geobacillus… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt W8QN64
- Elsewhere: RCSB PDB 6GQ0 · PDBe 6GQ0 · UniProt W8QN64
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