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Crystal structure of haspin in complex with 5-fluorotubercidin

Analyse Crystal structure of haspin in complex with 5-fluorotubercidin in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6G37
Type: protein
Length: 327 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: SERINE/THREONINE-protein kinase haspin
EC: 2.7.11.1
UniProt: Q8TF76
Ligands: FTU, PO4
Pockets: 2 · best druggability 0.74

Structure

x-ray diffraction · 1 distinct chain · 39% helix, 24% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	SERINE/THREONINE-protein kinase haspin (EC 2.7.11.1)	protein	327	39% helix, 24% strand	Q8TF76

Ligands and binding sites

FTU · 5-fluorotubercidin · ligand · chains A
PO4 · Phosphate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	572	0.74	0.81	66	FTU
2	50	0.55	0.90	15	empty

Compared structures

6G37 · Crystal structure of haspin in complex with 5-fluorotubercidin · the same entry in another collection · chain A against A, TM-score 1.00
Q8TF76 · AlphaFold monomer V2.0 prediction for SERINE/THREONINE-protein kinase haspin (Q8TF76) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8TF76
Elsewhere: RCSB PDB 6G37 · PDBe 6G37 · UniProt Q8TF76

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