Research workbench
NMR solution structure of yeast TSR2(1-152) in complex with S26A(100- 119)
Analyse NMR solution structure of yeast TSR2(1-152) in complex with S26A(100- 119) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6G04
- Type
- protein
- Length
- 182 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Pre-rRNA-processing protein TSR2; 40S ribosomal protein S26-a
- UniProt
- Q06672, P39938
- Pockets
- 1 · best druggability 0.50
Structure
solution nmr · 2 distinct chains · 44% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pre-rRNA-processing protein TSR2 | protein | 156 | 49% helix, 4% strand | Q06672 |
| B | 40S ribosomal protein S26-a | protein | 26 | 15% helix, 0% strand | P39938 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 206 | 0.50 | 0.76 | 32 | empty |
Interfaces
1 interface between chains.
- A–B · 1121 Ų buried · 14 hydrogen bonds · protein-protein
Compared structures
- 6G04 · NMR Solution Structure of Yeast TSR2(1-152) in Complex with S26A(100-119) · the same entry in another collection · chain A against A, TM-score 1.00
- Q06672 · AlphaFold monomer V2.0 prediction for pre-rRNA-processing protein TSR2 (Q06672) · a predicted model of the same protein · chain A against A, TM-score 0.88
- P39938 · AlphaFold monomer V2.0 prediction for 40S ribosomal protein S26-a (P39938) · a predicted model of the same protein · chain B against A, TM-score 0.37
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q06672
- Every structure of UniProt P39938
- Elsewhere: RCSB PDB 6G04 · PDBe 6G04 · UniProt Q06672 · UniProt P39938
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