Research workbench
A third complex of post-activated neocarzinostatin chromophore with DNA. bulge DNA binding from the minor groove
Analyse A third complex of post-activated neocarzinostatin chromophore with DNA. bulge… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1MP7
- Type
- DNA
- Length
- 10 nucleotides
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 5'-D(*GP*CP*CP*AP*GP*AP*GP*AP*GP*C)-3'
- Ligands
- NCG
Structure
solution nmr · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 5'-D(*GP*CP*CP*AP*GP*AP*GP*AP*GP*C)-3' | dna | 10 | — | — |
Ligands and binding sites
- NCG · [(R)-4-((1,3-dioxolane-2-oxy)-4-(S)-yl)-4-hydroxy]-(R)-10-(2-methylamino-5-methyl-2,6-dideoxygalactopyranosyl-oxy)-(R)-11-(2-hydroxy-5-methyl-7-methoxy-1-naphthoyl-oxy)-(R)-12-S-glutathionyl-4,10,11,12-tetrahydroindacene · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 1MP7 · A Third Complex of Post-Activated Neocarzinostatin Chromophore with DNA. Bulge DNA… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 1MP7 · PDBe 1MP7
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