Research workbench
Structure of H7(A/SHANGHAI/2/2013) influenza hemagglutinin in complex SD36
Analyse Structure of H7(A/SHANGHAI/2/2013) influenza hemagglutinin in complex SD36 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6FYU
- Type
- protein
- Length
- 1,828 residues
- Chains
- 9
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A4Y5QYN9, A0A0C4ZTH5
- Ligands
- NAG, NA
Structure
x-ray diffraction · 7 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 319 | — | A0A4Y5QYN9 |
| B | — | protein | 172 | — | A0A0C4ZTH5 |
| C, F | — | protein | 122 | — | — |
| D, G | — | protein | 318 | — | A0A4Y5QYN9 |
| E | — | protein | 168 | — | A0A0C4ZTH5 |
| H | — | protein | 168 | — | A0A0C4ZTH5 |
| I | — | protein | 121 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 15 copies · chains A, C, D, B, E, G, H
- NA · Sodium ion · metal · 4 copies · chains D, E, F, G
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6FYU · Structure of H7(A/Shanghai/2/2013) Influenza Hemagglutinin in complex SD36 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A4Y5QYN9
- Every structure of UniProt A0A0C4ZTH5
- Elsewhere: RCSB PDB 6FYU · PDBe 6FYU · UniProt A0A4Y5QYN9 · UniProt A0A0C4ZTH5
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