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Complex of rice blast (magnaporthe oryzae) effector protein avr-pikd with the hma domain of pikm-1 from rice (oryza sativa)

Analyse Complex of rice blast (magnaporthe oryzae) effector protein avr-pikd with the… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6FU9
Type: protein
Length: 329 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: B5UBC1, C4B8B8

Structure

x-ray diffraction · 3 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, C	—	protein	79	—	B5UBC1
B	—	protein	84	—	C4B8B8
D	—	protein	87	—	C4B8B8

Compared structures

6FU9 · Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikD with the HMA domain… · the same entry in another collection · chain B against B, TM-score 1.00
7BNT · Complex of rice blast (magnaporthe oryzae) effector protein avr-pikd with a predicted… · a predicted model of the same protein · chain B against C, TM-score 0.97
7BNT · Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikD with a predicted… · a predicted model of the same protein · chain B against C, TM-score 0.97
B5UBC1 · AlphaFold monomer V2.0 prediction for disease resistance protein PIKM1-ts (B5UBC1) · a predicted model of the same protein · chain A against A, TM-score 0.93

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt B5UBC1
Every structure of UniProt C4B8B8
Elsewhere: RCSB PDB 6FU9 · PDBe 6FU9 · UniProt B5UBC1 · UniProt C4B8B8

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