Research workbench
Structure of S. pombe MMI1 in complex with 11-mer RNA
Analyse Structure of S. pombe MMI1 in complex with 11-mer RNA in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6FPX
- Type
- protein + RNA
- Length
- 556 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- O74958
Structure
x-ray diffraction · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 177 | — | O74958 |
| B | — | rna | 10 | — | — |
| C | — | protein | 176 | — | O74958 |
| D | — | rna | 10 | — | — |
| E | — | protein | 175 | — | O74958 |
| F | — | rna | 8 | — | — |
Ligands and binding sites
- GOL · Glycerol · additive · 3 copies · chains A, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6FPX · Structure of S. pombe Mmi1 in complex with 11-mer RNA · the same entry in another collection · chain F against F, TM-score 1.00
- O74958 · AlphaFold monomer V2.0 prediction for RNA binding exosome specificity factor MMI1 (O74958) · a predicted model of the same protein · chain E against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O74958
- Elsewhere: RCSB PDB 6FPX · PDBe 6FPX · UniProt O74958
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