Research workbench

ATPASE

Analyse ATPASE in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1MO7
Type: protein
Length: 213 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: SODIUM/POTASSIUM-transporting ATPase alpha-1 chain
EC: 3.6.3.9
UniProt: P06685
Pockets: 4 · best druggability 0.55

Structure

solution nmr · 1 distinct chain · 22% helix, 15% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	SODIUM/POTASSIUM-transporting ATPase alpha-1 chain (EC 3.6.3.9)	protein	213	22% helix, 15% strand	P06685

Pockets

4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	218	0.55	0.78	37	empty
2	95	0.45	0.80	20	empty
3	140	0.42	0.75	17	empty
4	105	0.36	0.74	14	empty

Compared structures

1MO7 · ATPase · the same entry in another collection · chain A against A, TM-score 1.00
P06685 · AlphaFold monomer V2.0 prediction for SODIUM/POTASSIUM-transporting ATPase subunit… · a predicted model of the same protein · chain A against A, TM-score 0.85

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P06685
Elsewhere: RCSB PDB 1MO7 · PDBe 1MO7 · UniProt P06685

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