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DNA-RNA hybrid quadruplex with flipped tetrad

Analyse DNA-RNA hybrid quadruplex with flipped tetrad in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6FFR
Type
DNA
Length
22 nucleotides
Chains
1
Method
solution nmr
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
DNA/RNA (5'-R(*G)- D(P*GP*GP*AP*TP*GP*GP*GP*AP*CP*AP*CP*AP*GP*GP*GP*GP*AP*C)-R(P*G)…

Structure

solution nmr · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
ADNA/RNA (5'-R(*G)- D(P*GP*GP*AP*TP*GP*GP*GP*AP*CP*AP*CP*AP*GP*GP*GP*GP*AP*C)-R(P*G)- D(P*GP*G)-3')dna22——

Compared structures

  • 6FFR · DNA-RNA Hybrid Quadruplex with Flipped Tetrad · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

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