Research workbench
BIK1 cap-gly domain with etf peptide from BIM1
Analyse BIK1 cap-gly domain with etf peptide from BIM1 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6FC6
- Type
- protein
- Length
- 86 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Nuclear fusion protein BIK1; Protein BIM1
- UniProt
- P11709, P40013
Structure
x-ray diffraction · 2 distinct chains · 16% helix, 33% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nuclear fusion protein BIK1 | protein | 83 | 17% helix, 34% strand | P11709 |
| B | Protein BIM1 | protein | 3 | 0% helix, 0% strand | P40013 |
Interfaces
1 interface between chains.
- A–B · 314 Ų buried · 6 hydrogen bonds · protein-protein
Compared structures
- 6FC6 · Bik1 CAP-Gly domain with ETF peptide from Bim1 · the same entry in another collection · chain A against A, TM-score 1.00
- P40013 · AlphaFold monomer V2.0 prediction for protein BIM1 (P40013) · a predicted model of the same protein · chain B against A, TM-score 1.00
- P11709 · AlphaFold monomer V2.0 prediction for nuclear fusion protein BIK1 (P11709) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P11709
- Every structure of UniProt P40013
- Elsewhere: RCSB PDB 6FC6 · PDBe 6FC6 · UniProt P11709 · UniProt P40013
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