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The X-ray structure of lytic transglycosylase slt inactive mutant E503Q from pseudomonas aeruginosa

Analyse The X-ray structure of lytic transglycosylase slt inactive mutant E503Q from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6FC4
Type: protein
Length: 614 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Soluble lytic murein transglycosylase
EC: 4.2.2.-
UniProt: A0A069QJX4
Pockets: 6 · best druggability 0.44

Structure

x-ray diffraction · 1 distinct chain · 66% helix, 1% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Soluble lytic murein transglycosylase (EC 4.2.2.-)	protein	614	66% helix, 1% strand	A0A069QJX4

Ligands and binding sites

GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

6 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	175	0.44	0.74	23	empty
2	131	0.40	0.75	26	empty
3	57	0.31	0.76	12	empty
4	54	0.28	0.74	11	empty
5	52	0.26	0.73	13	empty

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

6FC4 · The X-ray Structure of Lytic Transglycosylase Slt inactive mutant E503Q from Pseudomonas… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A069QJX4
Elsewhere: RCSB PDB 6FC4 · PDBe 6FC4 · UniProt A0A069QJX4

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