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Human butyrylcholinesterase complexed with N-propargyliperidines

Analyse Human butyrylcholinesterase complexed with N-propargyliperidines in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6F7Q
Type
protein
Length
1,054 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P06276
Ligands
CWQ, NAG, FUL, FUC, SO4, CL

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B—protein527—P06276

Ligands and binding sites

  • CWQ · 2-[[(3~{R})-1-(2,3-dihydro-1~{H}-inden-2-yl)piperidin-3-yl]methyl-(8-oxidanylquinolin-2-yl)carbonyl-amino]ethyl-dimethyl-azanium · ligand · 4 copies · chains A, B
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 15 copies · chains A, B
  • FUL · beta-L-fucopyranose · sugar · 4 copies · chains A, B
  • FUC · alpha-L-fucopyranose · sugar
  • SO4 · Sulfate ion · ion · 5 copies · chains A, B
  • CL · Chloride ion · ion · chains B
  • EDO · 1,2-ethanediol · additive · 4 copies · chains A, B
  • GOL · Glycerol · additive · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6F7Q · Human Butyrylcholinesterase complexed with N-Propargyliperidines · the same entry in another collection · chain A against A, TM-score 1.00
  • P06276 · AlphaFold monomer V2.0 prediction for cholinesterase (P06276) · a predicted model of the same protein · chain A against A, TM-score 1.00

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