Research workbench
Trypanosoma brucei F1-ATPase
Analyse Trypanosoma brucei F1-ATPase in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6F5D
- Type
- protein
- Length
- 4,005 residues
- Chains
- 12
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9GS23, Q9GPE9, A0A161CFW5, P0DPG2, P0DPG3, P0DPG4
- Ligands
- ADP, MG
Structure
x-ray diffraction · 12 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 524 | — | Q9GS23 |
| B | — | protein | 524 | — | Q9GS23 |
| C | — | protein | 521 | — | Q9GS23 |
| D | — | protein | 481 | — | Q9GPE9 |
| E | — | protein | 487 | — | Q9GPE9 |
| F | — | protein | 488 | — | Q9GPE9 |
| G | — | protein | 277 | — | A0A161CFW5 |
| H | — | protein | 146 | — | P0DPG2 |
| I | — | protein | 66 | — | P0DPG3 |
| J | — | protein | 164 | — | P0DPG4 |
| K | — | protein | 162 | — | P0DPG4 |
| L | — | protein | 165 | — | P0DPG4 |
Ligands and binding sites
- ADP · Adenosine-5'-diphosphate · ligand · 6 copies · chains A, B, E, C, F, D
- MG · Magnesium ion · metal · 5 copies · chains A, B, C, D, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6F5D · Trypanosoma brucei F1-ATPase · the same entry in another collection · chain L against L, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9GS23
- Every structure of UniProt Q9GPE9
- Every structure of UniProt A0A161CFW5
- Every structure of UniProt P0DPG2
- Every structure of UniProt P0DPG3
- Every structure of UniProt P0DPG4
- Elsewhere: RCSB PDB 6F5D · PDBe 6F5D · UniProt Q9GS23 · UniProt Q9GPE9 · UniProt A0A161CFW5 · UniProt P0DPG2 · UniProt P0DPG3 · UniProt P0DPG4
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