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Structure of protein of unknown function yqjy from bacillus subtilis, probable acetyltransferase

Analyse Structure of protein of unknown function yqjy from bacillus subtilis, probable… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1MK4
Type: protein
Length: 314 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Hypothetical protein yqjy
UniProt: P54562
Pockets: 1 · best druggability 0.79

Structure

x-ray diffraction · 1 distinct chain · 28% helix, 31% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Hypothetical protein yqjy	protein	157	28% helix, 31% strand	P54562

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1094	0.79	0.80	93	empty

Interfaces

1 interface between chains.

A–B · 1308 Å² buried · 25 hydrogen bonds · protein-protein

Compared structures

1MK4 · Structure of Protein of Unknown Function YqjY from Bacillus subtilis, Probable… · the same entry in another collection · chain A against A, TM-score 1.00
P54562 · AlphaFold monomer V2.0 prediction for uncharacterized protein yqjy (P54562) · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P54562
Elsewhere: RCSB PDB 1MK4 · PDBe 1MK4 · UniProt P54562

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