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Structure of the active ggeef domain of a diguanylate cyclase from vibrio cholerae.
Analyse Structure of the active ggeef domain of a diguanylate cyclase from vibrio… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6EIB
- Type
- protein
- Length
- 632 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A0H3AFM6
- Ligands
- SO4
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 159 | — | A0A0H3AFM6 |
| B | — | protein | 160 | — | A0A0H3AFM6 |
| C | — | protein | 157 | — | A0A0H3AFM6 |
| D | — | protein | 156 | — | A0A0H3AFM6 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 18 copies · chains A, D, B, C
- EDO · 1,2-ethanediol · additive · 22 copies · chains A, C, D, B
- ACT · Acetate ion · additive · 3 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6EIB · Structure of the active GGEEF domain of a diguanylate cyclase from Vibrio cholerae. · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0H3AFM6
- Elsewhere: RCSB PDB 6EIB · PDBe 6EIB · UniProt A0A0H3AFM6
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