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Ohra (organic hydroperoxide resistance protein) wild type from chromobacterium violaceum

Analyse Ohra (organic hydroperoxide resistance protein) wild type from chromobacterium… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6ECY
Type: protein
Length: 298 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Organic hydroperoxide resistance protein
UniProt: Q7P1K4
Pockets: 2 · best druggability 0.68

Structure

x-ray diffraction · 2 distinct chains · 32% helix, 28% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Organic hydroperoxide resistance protein	protein	143	33% helix, 29% strand	Q7P1K4
B	Organic hydroperoxide resistance protein	protein	155	30% helix, 26% strand	Q7P1K4

Pockets

2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	279	0.68	0.83	33	empty
2	221	0.66	0.84	34	empty

Interfaces

1 interface between chains.

A–B · 3380 Å² buried · 58 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

6ECY · OhrA (Organic Hydroperoxide Resistance protein) wild type from chromobacterium violaceum · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q7P1K4
Elsewhere: RCSB PDB 6ECY · PDBe 6ECY · UniProt Q7P1K4

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