Research workbench
Crystal structure of the mbth-like protein fsck bound to the interface forming region of fsch adenylation domain from thermobifida fusca
Analyse Crystal structure of the mbth-like protein fsck bound to the interface forming… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6EBY
- Type
- protein
- Length
- 262 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Conserved protein mbth; Amino acid adenylation
- UniProt
- Q47NS3, Q47NS0
- Pockets
- 2 · best druggability 0.59
Structure
x-ray diffraction · 2 distinct chains · 16% helix, 38% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | Conserved protein mbth | protein | 54 | 26% helix, 35% strand | Q47NS3 |
| B, D | Amino acid adenylation | protein | 77 | 9% helix, 40% strand | Q47NS0 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 61 | 0.59 | 0.89 | 17 | empty |
| 2 | 77 | 0.57 | 0.87 | 17 | empty |
Interfaces
3 interfaces between chains.
- B–D · 1226 Ų buried · 15 hydrogen bonds · protein-protein
- A–B · 931 Ų buried · 13 hydrogen bonds · protein-protein
- C–D · 901 Ų buried · 18 hydrogen bonds · protein-protein
Compared structures
- 6EBY · Crystal structure of the MbtH-like protein FscK bound to the interface forming region of… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q47NS3
- Every structure of UniProt Q47NS0
- Elsewhere: RCSB PDB 6EBY · PDBe 6EBY · UniProt Q47NS3 · UniProt Q47NS0
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.