Research workbench
DHF91 filament
Analyse DHF91 filament in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6E9X
- Type
- protein
- Length
- 3,528 residues
- Chains
- 21
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DHF91 filament
- Pockets
- 20 · best druggability 0.72
Structure
electron microscopy · 1 distinct chain · 90% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| C, A, B, P, D, J, Q, E, K, R, F, L, S, G, M, T, H, N, U, I, O | DHF91 filament | protein | 168 | 90% helix, 0% strand | — |
Pockets
20 pockets found on a 1 Å grid, 14 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1167 | 0.72 | 0.76 | 154 | empty |
| 2 | 881 | 0.71 | 0.76 | 117 | empty |
| 3 | 809 | 0.70 | 0.76 | 113 | empty |
| 4 | 796 | 0.70 | 0.76 | 103 | empty |
| 5 | 586 | 0.64 | 0.75 | 77 | empty |
Interfaces
36 interfaces between chains.
- K–R · 430 Ų buried · 1 hydrogen bond · protein-protein
- P–E · 430 Ų buried · 1 hydrogen bond · protein-protein
- A–M · 428 Ų buried · 1 hydrogen bond · protein-protein
- E–L · 428 Ų buried · 1 hydrogen bond · protein-protein
- N–U · 427 Ų buried · 1 hydrogen bond · protein-protein
Compared structures
- 6E9X · DHF91 filament · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6E9X · PDBe 6E9X
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