Research workbench

The crystal structure of bovine ultralong antibody bov-3

Analyse The crystal structure of bovine ultralong antibody bov-3 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6E9H
Type: protein
Length: 469 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Bovine ultralong antibody bov-3 heavy chain; Bovine ultralong antibody bov-3 light chain
UniProt: Q3T101
Pockets: 3 · best druggability 0.54

Structure

x-ray diffraction · 2 distinct chains · 8% helix, 53% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Bovine ultralong antibody bov-3 heavy chain	protein	254	8% helix, 54% strand	—
B	Bovine ultralong antibody bov-3 light chain	protein	215	8% helix, 52% strand	Q3T101

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	366	0.54	0.74	43	empty
2	77	0.35	0.76	20	empty
3	77	0.33	0.75	16	empty

Interfaces

1 interface between chains.

A–B · 2039 Å² buried · 13 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 8 disulfide (disulfide).

Compared structures

6E9H · The crystal structure of bovine ultralong antibody BOV-3 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q3T101
Elsewhere: RCSB PDB 6E9H · PDBe 6E9H · UniProt Q3T101

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.