Research workbench
Selenomethionine derivative structure of a bacterial homolog to human lysosomal transporter, spinster
Analyse Selenomethionine derivative structure of a bacterial homolog to human lysosomal… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6E9C
- Type
- protein
- Length
- 479 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Major facilitator family transporter
- UniProt
- Q0C3L7
- Pockets
- 7 · best druggability 0.82
Structure
x-ray diffraction · 1 distinct chain · 76% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Major facilitator family transporter | protein | 479 | 76% helix, 0% strand | Q0C3L7 |
Pockets
7 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 938 | 0.82 | 0.83 | 76 | empty |
| 2 | 105 | 0.44 | 0.78 | 19 | empty |
| 3 | 62 | 0.37 | 0.79 | 15 | empty |
| 4 | 55 | 0.37 | 0.80 | 16 | empty |
| 5 | 75 | 0.32 | 0.74 | 14 | empty |
Modifications
Observed in the structure: 15 modified, 1 disulfide (engineered, disulfide).
Compared structures
- 6E9C · Selenomethionine Derivative Structure of A Bacterial Homolog to Human Lysosomal… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0C3L7
- Elsewhere: RCSB PDB 6E9C · PDBe 6E9C · UniProt Q0C3L7
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.