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Crystal structure of dcrb from salmonella enterica at 1.92 ångströms resolution

Analyse Crystal structure of dcrb from salmonella enterica at 1.92 ångströms resolution in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6E8A
Type: protein
Length: 291 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: DUF1795 domain-containing protein
UniProt: A0A0J5EW41
Pockets: 5 · best druggability 0.69

Structure

x-ray diffraction · 2 distinct chains · 21% helix, 45% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	DUF1795 domain-containing protein	protein	148	21% helix, 45% strand	A0A0J5EW41
B	DUF1795 domain-containing protein	protein	143	22% helix, 45% strand	A0A0J5EW41

Pockets

5 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	59	0.69	0.96	20	empty
2	403	0.60	0.76	29	empty
3	320	0.58	0.77	27	empty
4	68	0.58	0.89	19	empty
5	76	0.31	0.74	15	empty

Interfaces

1 interface between chains.

A–B · 594 Å² buried · 11 hydrogen bonds · protein-protein

Compared structures

6E8A · Crystal structure of DcrB from Salmonella enterica at 1.92 Angstroms resolution · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A0J5EW41
Elsewhere: RCSB PDB 6E8A · PDBe 6E8A · UniProt A0A0J5EW41

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