Research workbench
Crystal structure of lpqn involved in cell envelope biogenesis of mycobacterium tuberculosis
Analyse Crystal structure of lpqn involved in cell envelope biogenesis of mycobacterium… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6E5D
- Type
- protein
- Length
- 173 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Lipid binding protein lpqn
- UniProt
- O53780
- Pockets
- 2 · best druggability 0.40
Structure
x-ray diffraction · 1 distinct chain · 20% helix, 42% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lipid binding protein lpqn | protein | 173 | 20% helix, 42% strand | O53780 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 129 | 0.40 | 0.74 | 21 | empty |
| 2 | 58 | 0.34 | 0.77 | 15 | empty |
Compared structures
- 6E5D · Crystal structure of LpqN involved in cell envelope biogenesis of Mycobacterium… · the same entry in another collection · chain A against A, TM-score 1.00
- O53780 · AlphaFold monomer V2.0 prediction for lipoprotein lpqn (O53780) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O53780
- Elsewhere: RCSB PDB 6E5D · PDBe 6E5D · UniProt O53780
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