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Crystal structure of H-nox protein from nostoc sp V52W/L67W double- mutant.

Analyse Crystal structure of H-nox protein from nostoc sp V52W/L67W double- mutant. in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6DXI
Type: protein
Length: 189 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: H-nox
UniProt: A0A1Z4KG06
Ligands: HEM
Pockets: 1 · best druggability 0.85

Structure

x-ray diffraction · 1 distinct chain · 52% helix, 16% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	H-nox	protein	189	52% helix, 16% strand	A0A1Z4KG06

Ligands and binding sites

HEM · Protoporphyrin IX containing Fe · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	354	0.85	0.93	38	HEM

Compared structures

6DXI · Crystal structure of H-NOX protein from Nostoc sp V52W/L67W double-mutant. · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A1Z4KG06
Elsewhere: RCSB PDB 6DXI · PDBe 6DXI · UniProt A0A1Z4KG06

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