Research workbench
Crystal structure analysis of a 26MER RNA molecule, representing a new RNA motif, the hook-turn
Analyse Crystal structure analysis of a 26MER RNA molecule, representing a new RNA… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1MHK
- Type
- RNA
- Length
- 26 nucleotides
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- RNA 12-mer BCH12; RNA 14-mer BCH12
- Ligands
- BR
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| S | RNA 12-mer BCH12 | rna | 12 | — | — |
| L | RNA 14-mer BCH12 | rna | 14 | — | — |
Ligands and binding sites
- BR · Bromide ion · ion · chains S
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- S–L · 647 Ų buried · 39 hydrogen bonds · nucleic-nucleic
Compared structures
- 1MHK · Crystal Structure Analysis of a 26mer RNA molecule, representing a new RNA motif, the… · the same entry in another collection · chain S against S, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 1MHK · PDBe 1MHK
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