Research workbench
Superoxide dismutase sodci of salmonella enterica serovar typhimurium at 1.6 ångström resolution
Analyse Superoxide dismutase sodci of salmonella enterica serovar typhimurium at 1.6… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6D52
- Type
- protein
- Length
- 627 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- E8XDJ8
- Ligands
- ZN, CU
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 156 | — | E8XDJ8 |
| D, C, A | — | protein | 157 | — | E8XDJ8 |
Ligands and binding sites
- ZN · Zinc ion · metal · 4 copies · chains B, D, C, A
- CU · Copper (II) ion · metal · 4 copies · chains B, D, C, A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6D52 · Superoxide dismutase SodCI of Salmonella enterica serovar Typhimurium at 1.6 Angstrom… · the same entry in another collection · chain B against B, TM-score 1.00
- E8XDJ8 · AlphaFold monomer V2.0 prediction for superoxide dismutase [cu-zn] 1 (E8XDJ8) · a predicted model of the same protein · chain B against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt E8XDJ8
- Elsewhere: RCSB PDB 6D52 · PDBe 6D52 · UniProt E8XDJ8
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