Research workbench
Crystal structure of a DNA polymerase III subunit beta dnan sliding clamp from mycobacterium marinum
Analyse Crystal structure of a DNA polymerase III subunit beta dnan sliding clamp from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6D47
- Type
- protein
- Length
- 388 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Beta sliding clamp
- UniProt
- B2HI47
- Pockets
- 2 · best druggability 0.55
Structure
x-ray diffraction · 1 distinct chain · 22% helix, 43% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Beta sliding clamp | protein | 388 | 22% helix, 43% strand | B2HI47 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 84 | 0.55 | 0.86 | 31 | empty |
| 2 | 147 | 0.51 | 0.79 | 34 | empty |
Compared structures
- 6D47 · Crystal structure of a DNA polymerase III subunit beta DnaN sliding clamp from… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B2HI47
- Elsewhere: RCSB PDB 6D47 · PDBe 6D47 · UniProt B2HI47
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.