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Principles and pitfalls in designing site directed peptide ligands

Analyse Principles and pitfalls in designing site directed peptide ligands in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1MCE
Type
protein
Length
437 residues
Chains
3
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P0DOX8

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B—protein216—P0DOX8
P—protein5——

Compared structures

  • 1MCE · Principles and pitfalls in designing site directed peptide ligands · the same entry in another collection · chain A against A, TM-score 1.00
  • P0DOX8 · AlphaFold monomer V2.0 prediction for immunoglobulin lambda-1 light chain (P0DOX8) · a predicted model of the same protein · chain A against A, TM-score 0.51

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