Research workbench
Lyetxi-B, a synthetic peptide derived from lycosa erythrognatha spider venom, shows potent antibiotic activity, in vitro and in vivo
Analyse Lyetxi-B, a synthetic peptide derived from lycosa erythrognatha spider venom… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6CL3
- Type
- protein
- Length
- 24 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Toxin lyetx 1
- UniProt
- C0HJU9
- Ligands
- NH2
Structure
solution nmr · 1 distinct chain · 92% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Toxin lyetx 1 | protein | 24 | 92% helix, 0% strand | C0HJU9 |
Ligands and binding sites
- NH2 · Amino group · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6CL3 · LyeTxI-b, a synthetic peptide derived from Lycosa erythrognatha spider venom, shows… · the same entry in another collection · chain A against A, TM-score 1.00
- C0HJU9 · AlphaFold monomer V2.0 prediction for toxin lyetx 1 (C0HJU9) · a predicted model of the same protein · chain A against A, TM-score 0.43
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C0HJU9
- Elsewhere: RCSB PDB 6CL3 · PDBe 6CL3 · UniProt C0HJU9
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