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Solution structure of translation initiation factor 1 from clostridium difficile

Analyse Solution structure of translation initiation factor 1 from clostridium difficile in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6C00
Type: protein
Length: 72 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Translation initiation factor if-1
UniProt: Q18CI2
Pockets: 1 · best druggability 0.39

Structure

solution nmr · 1 distinct chain · 7% helix, 51% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Translation initiation factor if-1	protein	72	7% helix, 51% strand	Q18CI2

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	94	0.39	0.76	21	empty

Compared structures

6C00 · Solution structure of translation initiation factor 1 from Clostridium difficile · the same entry in another collection · chain A against A, TM-score 1.00
Q18CI2 · AlphaFold monomer V2.0 prediction for translation initiation factor if-1 (Q18CI2) · a predicted model of the same protein · chain A against A, TM-score 0.86

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q18CI2
Elsewhere: RCSB PDB 6C00 · PDBe 6C00 · UniProt Q18CI2

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