Research workbench
Crystal structure of adenylosuccinate synthetase from legionella pneumophila philadelphia 1
Analyse Crystal structure of adenylosuccinate synthetase from legionella pneumophila… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6BS7
- Type
- protein
- Length
- 390 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Adenylosuccinate synthetase
- EC
- 6.3.4.4
- UniProt
- Q8RNM2
- Pockets
- 3 · best druggability 0.56
Structure
x-ray diffraction · 1 distinct chain · 39% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Adenylosuccinate synthetase (EC 6.3.4.4) | protein | 390 | 39% helix, 20% strand | Q8RNM2 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 299 | 0.56 | 0.77 | 45 | empty |
| 2 | 73 | 0.33 | 0.75 | 16 | empty |
| 3 | 50 | 0.30 | 0.77 | 15 | empty |
Compared structures
- 6BS7 · Crystal structure of Adenylosuccinate synthetase from Legionella pneumophila Philadelphia… · the same entry in another collection · chain A against A, TM-score 1.00
- Q8RNM2 · AlphaFold monomer V2.0 prediction for adenylosuccinate synthetase (Q8RNM2) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8RNM2
- Elsewhere: RCSB PDB 6BS7 · PDBe 6BS7 · UniProt Q8RNM2
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