Research workbench
Secreted serine protease vesc from vibrio cholerae
Analyse Secreted serine protease vesc from vibrio cholerae in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6BQM
- Type
- protein
- Length
- 460 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Serine protease vesc
- EC
- 3.4.21.-
- UniProt
- A0A0H3AHB9
- Pockets
- 3 · best druggability 0.54
Structure
x-ray diffraction · 1 distinct chain · 9% helix, 48% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Serine protease vesc (EC 3.4.21.-) | protein | 460 | 9% helix, 48% strand | A0A0H3AHB9 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 286 | 0.54 | 0.75 | 35 | empty |
| 2 | 147 | 0.51 | 0.79 | 29 | empty |
| 3 | 75 | 0.44 | 0.80 | 19 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Compared structures
- 6BQM · Secreted serine protease VesC from Vibrio cholerae · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0H3AHB9
- Elsewhere: RCSB PDB 6BQM · PDBe 6BQM · UniProt A0A0H3AHB9
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