Research workbench
Eubacterium eligens beta-glucuronidase
Analyse Eubacterium eligens beta-glucuronidase in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6BJW
- Type
- protein
- Length
- 582 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Glycoside hydrolase family 2 candidate B-glucuronidase
- UniProt
- C4Z6Z2
- Pockets
- 5 · best druggability 0.66
Structure
x-ray diffraction · 1 distinct chain · 18% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glycoside hydrolase family 2 candidate B-glucuronidase | protein | 582 | 18% helix, 28% strand | C4Z6Z2 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 64 | 0.66 | 0.94 | 21 | empty |
| 2 | 228 | 0.64 | 0.82 | 39 | empty |
| 3 | 274 | 0.61 | 0.80 | 41 | empty |
| 4 | 62 | 0.47 | 0.83 | 23 | empty |
| 5 | 52 | 0.35 | 0.79 | 21 | empty |
Compared structures
- 6BJW · Eubacterium eligens Beta-glucuronidase · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C4Z6Z2
- Elsewhere: RCSB PDB 6BJW · PDBe 6BJW · UniProt C4Z6Z2
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