Research workbench
Galactose-binding lectin from mytilus californianus, ISOFORM1
Analyse Galactose-binding lectin from mytilus californianus, ISOFORM1 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6BFM
- Type
- protein
- Length
- 301 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Lectin
- UniProt
- A0A0P0E482
Structure
x-ray diffraction · 2 distinct chains · 6% helix, 43% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lectin | protein | 150 | 6% helix, 43% strand | A0A0P0E482 |
| B | Lectin | protein | 151 | 6% helix, 43% strand | A0A0P0E482 |
Ligands and binding sites
- GOL · Glycerol · additive · 9 copies · chains A, B
- ACT · Acetate ion · additive · chains A
- PEG · Di(hydroxyethyl)ether · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 731 Ų buried · 9 hydrogen bonds · protein-protein
Compared structures
- 6BFM · Galactose-binding Lectin from Mytilus californianus, Isoform1 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0P0E482
- Elsewhere: RCSB PDB 6BFM · PDBe 6BFM · UniProt A0A0P0E482
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