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Ybtt - type II thioesterase from yersiniabactin NRPS/PKS biosynthetic pathway

Analyse Ybtt - type II thioesterase from yersiniabactin NRPS/PKS biosynthetic pathway in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6BA8
Type: protein
Length: 249 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Iron aquisition yersiniabactin synthesis enzyme, ybtt
EC: 3.1.2.-
UniProt: A0A061LQM0
Pockets: 2 · best druggability 0.69

Structure

x-ray diffraction · 1 distinct chain · 42% helix, 16% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Iron aquisition yersiniabactin synthesis enzyme, ybtt (EC 3.1.2.-)	protein	249	42% helix, 16% strand	A0A061LQM0

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	301	0.69	0.83	46	empty
2	58	0.40	0.81	14	empty

Compared structures

6BA8 · YbtT - Type II thioesterase from Yersiniabactin NRPS/PKS biosynthetic pathway · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A061LQM0
Elsewhere: RCSB PDB 6BA8 · PDBe 6BA8 · UniProt A0A061LQM0

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