Research workbench
Crystal structure of flavin monooxygenase cmoj (earlier ytnj) bound with FMN
Analyse Crystal structure of flavin monooxygenase cmoj (earlier ytnj) bound with FMN in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6ASL
- Type
- protein
- Length
- 430 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative monooxygenase moxc
- UniProt
- O34974
- Ligands
- FMN, LFN
- Pockets
- 4 · best druggability 0.64
Structure
x-ray diffraction · 1 distinct chain · 43% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative monooxygenase moxc | protein | 430 | 43% helix, 13% strand | O34974 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 576 | 0.64 | 0.75 | 76 | FMN, LFN |
| 2 | 125 | 0.49 | 0.79 | 14 | empty |
| 3 | 69 | 0.42 | 0.80 | 16 | empty |
| 4 | 69 | 0.39 | 0.79 | 19 | empty |
Compared structures
- 6ASL · Crystal Structure of Flavin monooxygenase CmoJ (earlier YtnJ) bound with FMN · the same entry in another collection · chain A against A, TM-score 1.00
- O34974 · AlphaFold monomer V2.0 prediction for putative monooxygenase moxc (O34974) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O34974
- Elsewhere: RCSB PDB 6ASL · PDBe 6ASL · UniProt O34974
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