Research workbench
Crystal structure of slmap-SIKE1 complex
Analyse Crystal structure of slmap-SIKE1 complex in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6AKM
- Type
- protein
- Length
- 93 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Suppressor of ikbke 1; Sarcolemmal membrane-associated protein
- UniProt
- Q9BRV8, Q14BN4
Structure
x-ray diffraction · 2 distinct chains · 91% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Suppressor of ikbke 1 | protein | 47 | 91% helix, 0% strand | Q9BRV8 |
| B | Sarcolemmal membrane-associated protein | protein | 46 | 91% helix, 0% strand | Q14BN4 |
Ligands and binding sites
- GOL · Glycerol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 969 Ų buried · 3 hydrogen bonds · protein-protein
Compared structures
- 6AKM · Crystal structure of SLMAP-SIKE1 complex · the same entry in another collection · chain A against A, TM-score 1.00
- Q14BN4 · AlphaFold monomer V2.0 prediction for sarcolemmal membrane-associated protein (Q14BN4) · a predicted model of the same protein · chain B against A, TM-score 0.89
- Q9BRV8 · AlphaFold monomer V2.0 prediction for suppressor of ikbke 1 (Q9BRV8) · a predicted model of the same protein · chain A against A, TM-score 0.87
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9BRV8
- Every structure of UniProt Q14BN4
- Elsewhere: RCSB PDB 6AKM · PDBe 6AKM · UniProt Q9BRV8 · UniProt Q14BN4
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