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Structure of histone demethylase REF6 at 1.8A

Analyse Structure of histone demethylase REF6 at 1.8A in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6A59
Type: protein
Length: 114 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Lysine-specific demethylase REF6
EC: 1.14.11.-
UniProt: Q9STM3
Ligands: ZN

Structure

x-ray diffraction · 1 distinct chain · 36% helix, 12% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Lysine-specific demethylase REF6 (EC 1.14.11.-)	protein	114	36% helix, 12% strand	Q9STM3

Ligands and binding sites

ZN · Zinc ion · metal · 4 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6A59 · Structure of histone demethylase REF6 at 1.8A · the same entry in another collection · chain A against A, TM-score 1.00
Q9STM3 · AlphaFold monomer V2.0 prediction for lysine-specific demethylase REF6 (Q9STM3) · a predicted model of the same protein · chain A against A, TM-score 0.68

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9STM3
Elsewhere: RCSB PDB 6A59 · PDBe 6A59 · UniProt Q9STM3

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