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A ubiquitin-like protein from the hyperthermophilic archaea caldiarchaeum subterraneum

Analyse A ubiquitin-like protein from the hyperthermophilic archaea caldiarchaeum… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5ZEW
Type: protein
Length: 77 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Ubiquitin-like protein
UniProt: E6N8B8
Pockets: 1 · best druggability 0.47

Structure

solution nmr · 1 distinct chain · 16% helix, 30% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Ubiquitin-like protein	protein	77	16% helix, 30% strand	E6N8B8

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	107	0.47	0.79	27	empty

Compared structures

5ZEW · A ubiquitin-like protein from the hyperthermophilic archaea Caldiarchaeum subterraneum · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt E6N8B8
Elsewhere: RCSB PDB 5ZEW · PDBe 5ZEW · UniProt E6N8B8

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