Research workbench
An anthrahydroquino-gama-pyrone synthase TXN09 complexed with sum
Analyse An anthrahydroquino-gama-pyrone synthase TXN09 complexed with sum in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5Z4F
- Type
- protein
- Length
- 154 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- TXNO9
- UniProt
- A0A0K1H313
- Ligands
- 96F
- Pockets
- 2 · best druggability 0.84
Structure
solution nmr · 1 distinct chain · 21% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TXNO9 | protein | 154 | 21% helix, 29% strand | A0A0K1H313 |
Ligands and binding sites
- 96F · 1,8-dihydroxy-2-[(4R)-4-hydroxy-4-methyl-3-oxohexanoyl]-3-methylanthracene-9,10-dione · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 618 | 0.84 | 0.88 | 65 | 96F |
| 2 | 81 | 0.37 | 0.76 | 21 | empty |
Compared structures
- 5Z4F · An anthrahydroquino-Gama-pyrone synthase Txn09 complexed with SUM · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0K1H313
- Elsewhere: RCSB PDB 5Z4F · PDBe 5Z4F · UniProt A0A0K1H313
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