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Trimeric alpha-helix-inserted circular permutant of cytochrome C555

Analyse Trimeric alpha-helix-inserted circular permutant of cytochrome C555 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
5Z25
Type
protein
Length
96 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Cytochrome C552
UniProt
O67504
Ligands
HEC

Structure

x-ray diffraction · 1 distinct chain · 68% helix, 2% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ACytochrome C552protein9668% helix, 2% strandO67504

Ligands and binding sites

  • HEC · Heme C · ligand · chains A
  • PG4 · Tetraethylene glycol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 2 cofactor (heme c attachment).

Compared structures

  • 5Z25 · Trimeric Alpha-Helix-Inserted Circular Permutant of Cytochrome c555 · the same entry in another collection · chain A against A, TM-score 1.00

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