Research workbench
Crystal structure of asqi
Analyse Crystal structure of asqi in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5YY3
- Type
- protein
- Length
- 577 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Uncharacterized protein asqi
- UniProt
- C8VJQ3
- Pockets
- 12 · best druggability 0.76
Structure
x-ray diffraction · 1 distinct chain · 36% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized protein asqi | protein | 577 | 36% helix, 17% strand | C8VJQ3 |
Pockets
12 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 103 | 0.76 | 0.97 | 22 | empty |
| 2 | 73 | 0.74 | 0.98 | 20 | empty |
| 3 | 60 | 0.72 | 0.98 | 21 | empty |
| 4 | 263 | 0.69 | 0.84 | 34 | empty |
| 5 | 186 | 0.68 | 0.86 | 24 | empty |
Compared structures
- 5YY3 · Crystal structure of AsqI · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C8VJQ3
- Elsewhere: RCSB PDB 5YY3 · PDBe 5YY3 · UniProt C8VJQ3
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