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Crystal structure of a hypothetical protein RV3716C from mycobacterium tuberculosis

Analyse Crystal structure of a hypothetical protein RV3716C from mycobacterium… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
5YRX
Type
protein
Length
71 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Nucleoid-associated protein RV3716C
UniProt
P9WNR9
Ligands
CD

Structure

x-ray diffraction · 1 distinct chain · 42% helix, 25% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ANucleoid-associated protein RV3716Cprotein7142% helix, 25% strandP9WNR9

Ligands and binding sites

  • CD · Cadmium ion · metal · chains A
  • EDO · 1,2-ethanediol · additive · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5YRX · Crystal structure of a hypothetical protein Rv3716c from Mycobacterium tuberculosis · the same entry in another collection · chain A against A, TM-score 1.00
  • P9WNR9 · AlphaFold monomer V2.0 prediction for nucleoid-associated protein RV3716C (P9WNR9) · a predicted model of the same protein · chain A against A, TM-score 0.94

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