Research workbench
Crystal structure of porcine delta coronavirus NSP9
Analyse Crystal structure of porcine delta coronavirus NSP9 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5YM6
- Type
- protein
- Length
- 390 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- NSP9
- UniProt
- X2G6C4
Structure
x-ray diffraction · 4 distinct chains · 13% helix, 55% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NSP9 | protein | 97 | 12% helix, 54% strand | X2G6C4 |
| B | NSP9 | protein | 99 | 14% helix, 55% strand | X2G6C4 |
| C | NSP9 | protein | 99 | 14% helix, 57% strand | X2G6C4 |
| D | NSP9 | protein | 95 | 13% helix, 55% strand | X2G6C4 |
Interfaces
2 interfaces between chains.
- C–D · 1087 Ų buried · 12 hydrogen bonds · protein-protein
- A–B · 1021 Ų buried · 9 hydrogen bonds · protein-protein
Compared structures
- 5YM6 · Crystal Structure of porcine delta coronavirus nsp9 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt X2G6C4
- Elsewhere: RCSB PDB 5YM6 · PDBe 5YM6 · UniProt X2G6C4
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.